Selected Publications
Recent
Do, H.N., Haldane, A., Levy, R.M., & Miao, Y. (2022). Unique features of different classes of G-protein-coupled receptors revealed from sequence coevolutionary and structural analysis. Proteins, 90(2), 601-614. United States. 10.1002/prot.26256
McGee, F., Hauri, S., Novinger, Q., Vucetic, S., Levy, R.M., Carnevale, V., & Haldane, A. (2021). The generative capacity of probabilistic protein sequence models. Nat Commun, 12(1), 6302. England. 10.1038/s41467-021-26529-9
Haldane, A. & Levy, R.M. (2021). Mi3-GPU: MCMC-based Inverse Ising Inference on GPUs for protein covariation analysis. Comput Phys Commun, 260. Netherlands. 10.1016/j.cpc.2020.107312